Package: PAS 1.2.5

PAS: Polygenic Analysis System (PAS)

An R package for polygenic trait analysis.

Authors:Zhiqiu Hu; Shizhong Xu; Zhiquan Wang; Rongcai Yang

PAS_1.2.5.tar.gz
PAS_1.2.5.zip(r-4.5)PAS_1.2.5.zip(r-4.4)PAS_1.2.5.zip(r-4.3)
PAS_1.2.5.tgz(r-4.5-any)PAS_1.2.5.tgz(r-4.4-any)PAS_1.2.5.tgz(r-4.3-any)
PAS_1.2.5.tar.gz(r-4.5-noble)PAS_1.2.5.tar.gz(r-4.4-noble)
PAS_1.2.5.tgz(r-4.4-emscripten)PAS_1.2.5.tgz(r-4.3-emscripten)
PAS.pdf |PAS.html
PAS/json (API)

# Install 'PAS' in R:
install.packages('PAS', repos = c('https://zhiqiuhu.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • map - Beef data
  • x - Beef data
  • y - Beef data

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.00 score 7 scripts 221 downloads 178 mentions 4 exports 10 dependencies

Last updated 7 years agofrom:1f773388a7. Checks:3 OK, 5 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 15 2025
R-4.5-winNOTEFeb 15 2025
R-4.5-macNOTEFeb 15 2025
R-4.5-linuxNOTEFeb 15 2025
R-4.4-winNOTEFeb 15 2025
R-4.4-macNOTEFeb 15 2025
R-4.3-winOKFeb 15 2025
R-4.3-macOKFeb 15 2025

Exports:binmodplot.binmodpredict.binmodprint.binmod

Dependencies:codetoolsforeachglmnetiteratorslatticeMatrixRcppRcppEigenshapesurvival

Readme and manuals

Help Manual

Help pageTopics
Polygenic Analysis System (PAS)PAS
plot functionbinmod.plot PAS.binmod.plot plot plot.binmod
predictbinmod.predict PAS.binmod.predict predict predict.binmod
binmodbinmod PAS.binmod
beef datadata map PAS.binmod.beef x y
binmod.printbinmod.print PAS.binmod.print print print.binmod